chore: Upgrade smallstep libs

[francislavoie]

See smallstep/nosql#12 for context.

/cc @ThinkChaos regarding #3525 (comment)

There's a surprising amount of go.sum changes from this, but I don't think we need to worry about that. It's a side effect of Go not pruning the graph in Go 1.16, I think once we bump to Go 1.17, it should get shrunken down significantly. See https://golang.org/ref/mod#graph-pruning

[mholt]

So to be sure I follow, this removes the pb.proto warning and removes the cgo dependency?

[francislavoie]

Doesn't remove the CGO dependency yet. That's gonna require dgraph-io/badger#1736 first, because smallstep/nosql seems to not be able to safely upgrade to badger v3 without breaking changes, so I'm trying to get badger to backport the fix for that to their v2 branch.

But AFAIK yeah it should solve the pb.proto issue and some other random problems that have shown up since.

[ThinkChaos]

I can confirm it fixes the pb.proto warning for me.

[mholt]

Thanks for helping push this along! Looking forward to getting rid of that cgo dependency too.