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28 Open 37 Closed
28 Open 37 Closed
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Issues list

Issue with running Female samples with all chromosomes (22 + XY) even after using --sex-samp F.
#129 opened Dec 4, 2024 by anukrati0306
--max-proc-read default
#128 opened Sep 6, 2024 by yangxy289
When I try to install GangSTR, I always encounter this problem repeatedly during the ‘make’ step
#127 opened Aug 11, 2024 by beixuancheng
1
bed file format
#126 opened Mar 26, 2024 by dwill023
Annotate the output with STRbase/13 CORDIS core
#125 opened Oct 24, 2023 by csittz
chr_make_reference.sh: line 11: =X: command not found
#123 opened Jul 28, 2023 by kimi-du-bio
[GangSTR-2.5.0] ERROR: Error extracting read length
#122 opened Jul 18, 2023 by jackzhong1995
1
generate str_info_file
#121 opened Feb 14, 2023 by sy8645
local realignment in GangSTR
#120 opened Dec 8, 2022 by kirannai
Help : Genotyping vcf results (loci call & Realignment resutls)
#119 opened Dec 5, 2022 by kirannai
Allowing mismatch in Long str
#118 opened May 16, 2022 by DomManou
Alleles reported as numbers rather than bases in output VCF
#117 opened May 3, 2022 by alexpiper
Support for unequal read lengths in BAM
#116 opened Mar 11, 2022 by dboceck
MarkDuplicates reads filter
#115 opened Dec 30, 2021 by zhpn1024
Issue about "Not enough reads extracted. Skipping locus.."
#114 opened Dec 8, 2021 by tanlaboratory
1
error after trimming sequences
#113 opened Nov 9, 2021 by CocoMlle
HELP
#112 opened Jul 23, 2021 by zhangjinpengGithub
3
str::out_of_range
#106 opened May 10, 2021 by mvcakir
2
Downstream filtering for haploid TRs
#105 opened Apr 5, 2021 by Owuorgpo
4
GangSTR --help outputs error
#104 opened Mar 26, 2021 by MeiShu00
GangSTR fails on small input files
#103 opened Mar 2, 2021 by bkohrn
3
REPCN number is incorrect for x chromosome
#91 opened Jun 30, 2020 by LiterallyUniqueLogin
ERROR: Not enough reads for [sample ID]. Please set insert size distribution manually.
#86 opened Dec 6, 2019 by shiyirong
10
Key Error from REF and ALT fields when running DumpSTR on GangSTR vcf file
#81 opened Nov 13, 2019 by BonnieCSE
@nmmsv
5
Verify checksums for files downloaded over ftp or http enhancement
#79 opened Nov 3, 2019 by Oodnadatta
1
ProTip! Adding no:label will show everything without a label.