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Update from IQSS #67

Merged
merged 1,581 commits into from
Dec 20, 2022
Merged

Update from IQSS #67

merged 1,581 commits into from
Dec 20, 2022

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lubitchv
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What this PR does / why we need it:

Which issue(s) this PR closes:

Closes #

Special notes for your reviewer:

Suggestions on how to test this:

Does this PR introduce a user interface change? If mockups are available, please link/include them here:

Is there a release notes update needed for this change?:

Additional documentation:

HenningTimm and others added 30 commits October 18, 2022 21:28
FWIW: There is still a dataverse.files.hide-schema-dot-org-download-urls that, if false, will stop any contentUrls from being sent
…/update-commons-text

GDCC/commons-text update
removed bullet tabular data download all formats
With only westLongitude added and the other three coordinates left
empty, we were getting the following exception. A null check was added
to prevent this.

Command [DatasetCreate dataset:132] failed: Exception thrown from bean:
javax.ejb.EJBTransactionRolledbackException: Exception thrown from
bean:
org.apache.solr.client.solrj.impl.HttpSolrClient$RemoteSolrException:
Error from server at http://localhost:8983/solr/collection1: ERROR:
[doc=dataset_132_draft] Error adding field
'solr_bboxtype'='ENVELOPE(null,null,null,null)' msg=Unable to parse
shape given formats "lat,lon", "x y" or as WKT because
java.text.ParseException: Expected a number input:
ENVELOPE(null,null,null,null)
Removed incorrect example added link
clarified moving dataverse collection description
kcondon and others added 28 commits December 12, 2022 13:57
…in the wait for an async. operation + some extra logging (#8843)
…/8730-fix_progress_for_direct_uploads

IQSS/8730 - fix direct upload progress
#9074 - Added support for building sphinx docs using python 3.10+
The Docker Login Actions do not enable logging in to
docker.io, but a standard registry. By not overriding
the registry, Docker Maven Plugin will use the
one supplied by Docker context (which the authorization
was done for by docker/login-action)
@lubitchv lubitchv merged commit ec31196 into lubitchv:develop Dec 20, 2022
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Pull Request Test Coverage Report for Build #46

  • 824 of 4313 (19.11%) changed or added relevant lines in 152 files are covered.
  • 83 unchanged lines in 36 files lost coverage.
  • Overall coverage increased (+0.3%) to 19.985%

Changes Missing Coverage Covered Lines Changed/Added Lines %
src/main/java/edu/harvard/iq/dataverse/Dataverse.java 9 10 90.0%
src/main/java/edu/harvard/iq/dataverse/HandlenetServiceBean.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/Info.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/datadeposit/CollectionDepositManagerImpl.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/datadeposit/ContainerManagerImpl.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/datadeposit/SwordServiceBean.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/imports/ImportDDIServiceBean.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/imports/ImportGenericServiceBean.java 6 7 85.71%
src/main/java/edu/harvard/iq/dataverse/api/util/JsonResponseBuilder.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/authorization/AuthenticationServiceBean.java 0 1 0.0%
Files with Coverage Reduction New Missed Lines %
src/main/java/edu/harvard/iq/dataverse/api/DownloadInstance.java 1 0%
src/main/java/edu/harvard/iq/dataverse/api/Search.java 1 0%
src/main/java/edu/harvard/iq/dataverse/dataaccess/FileAccessIO.java 1 69.42%
src/main/java/edu/harvard/iq/dataverse/dataaccess/S3AccessIO.java 1 8.67%
src/main/java/edu/harvard/iq/dataverse/DataCitation.java 1 59.63%
src/main/java/edu/harvard/iq/dataverse/dataset/DatasetUtil.java 1 28.25%
src/main/java/edu/harvard/iq/dataverse/DatasetFieldServiceBean.java 1 1.51%
src/main/java/edu/harvard/iq/dataverse/DatasetVersion.java 1 52.33%
src/main/java/edu/harvard/iq/dataverse/engine/command/impl/AbstractSubmitToArchiveCommand.java 1 0%
src/main/java/edu/harvard/iq/dataverse/FilePage.java 1 0%
Totals Coverage Status
Change from base Build #39: 0.3%
Covered Lines: 15780
Relevant Lines: 78958

💛 - Coveralls

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