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Use constrained layout in matplotlib visualization #12050

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merged 35 commits into from
Oct 7, 2023

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mscheltienne
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@mscheltienne mscheltienne commented Oct 2, 2023

Closes #12024

Bump the minimum requirement for matplotlib to 3.5.0, which supports the recommended layout="constrained" argument and which will be out for 2 years on the 16th of November.

  • Get CIs green
  • eradicate subplots_adjust
  • Run [circle full]
  • Visual inspection

@mscheltienne mscheltienne marked this pull request as draft October 2, 2023 19:39
@larsoner
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larsoner commented Oct 5, 2023

Last I think is to eradicate subplots_adjust in favor of layout="constrained" in examples, then this should be good to go

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larsoner commented Oct 6, 2023

Looking briefly through the docs (e.g., main vs PR) I think what we now need to fix aesthetically are:

  1. evoked.plot_topomap:

    image

  2. evoked.plot_joint

    image

I'll see if these are easy enough to fix. I'm a bit wary since these bits of code are complicated but we'll see 🤞

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larsoner commented Oct 6, 2023

@larsoner larsoner marked this pull request as ready for review October 6, 2023 20:40
@drammock
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drammock commented Oct 7, 2023

Looks good!

spectrum = epochs["visual/right"].compute_psd()
spectrum.plot_topomap()

in this tutorial looks wonky, and the x axis title is getting cut off by the bottom edge of the figure in the immediately prior plot on that same page.

Let's handle those in a follow-up PR (along with whatever else we notice in the coming weeks)

@drammock drammock merged commit fdaeb86 into mne-tools:main Oct 7, 2023
28 checks passed
@mscheltienne mscheltienne deleted the layout branch October 8, 2023 21:06
larsoner added a commit to larsoner/mne-python that referenced this pull request Oct 10, 2023
* upstream/main: (37 commits)
  Use constrained layout in matplotlib visualization (mne-tools#12050)
  Add raw stc (mne-tools#12001)
  [MRG] update codeowners (mne-tools#12089)
  DOC: Morlet wavelet length in tfr_morlet (mne-tools#12073)
  BUG: Fix bug with mne browser backend (mne-tools#12078)
  Cache avatars (mne-tools#12077)
  BUG: Fix bug with ch_name resolution (mne-tools#12086)
  add unicode roundtrip for FIF (mne-tools#12080)
  add Ivan to names.inc (mne-tools#12081)
  MAINT: Work around PySide 6.5.3 event loop error (mne-tools#12076)
  mne-tools#11608, buggfix and docstring update (mne-tools#12066)
  MAINT: Fix broken examples (mne-tools#12074)
  Add UI Event linking to DraggableColorbar (mne-tools#12057)
  handle lazy loading through .pyi type stubs (mne-tools#12072)
  BUG: Fix bug with sensor_colors (mne-tools#12068)
  clean  up some deprecations (mne-tools#12067)
  Allow not dropping bads when creating or plotting Spectrum objs (mne-tools#12006)
  Collapsible html repr for raw/info (mne-tools#12064)
  BUG: Fix bug with pickling MNEBadsList (mne-tools#12063)
  add details for Denis (mne-tools#12065)
  ...
snwnde pushed a commit to snwnde/mne-python that referenced this pull request Mar 20, 2024
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Eric Larson <larson.eric.d@gmail.com>
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ENH: Switch to constrained layout in figure creation
3 participants