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Super ticket: driving themes for triage #693

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monicacecilia opened this issue May 14, 2024 · 0 comments

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monicacecilia commented May 14, 2024 •

edited by sagehrke

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UI

long-term organization
- Super Ticket Upgrade the Monarch UI (sup) #737

Ingest

Modularization (includes KGX-Koza)
- Super Ticket Implement modular ingests (sup) #714
Alignment:
- Super Ticket Implement a unified ingest pipeline (sup) #710
Genotype to Phenotype
- Super Ticket Add Genotype to Phenotype to Monarch-KG/app (sup) #715

Semsimian

bugs
Phenologs - alignment between similarity methods
- https://github.com/monarch-initiative/monarch-phenologs

Data Access Tools

Monarch-R
- https://github.com/monarch-initiative/monarchr
Monarch Assistant (LLM)
- https://github.com/monarch-initiative/phenomics-assistant
Neo4J

Infrastructure

Kubernetes
API logging
TRAPI KP
Koza

Exomiser / Pheval alignment with KG

Identify ingests shared between KG & Exomiser
Consider implementing shared upstream ingest processes to align any ingest opinions

sagehrke changed the title ~~Superticket: 2024-05 Release (example)~~ Superticket: driving themes for triage May 2024

sagehrke pinned this issue

sagehrke changed the title ~~Superticket: driving themes for triage May 2024~~ Superticket: driving themes for triage

sagehrke changed the title ~~Superticket: driving themes for triage~~ Super ticket: driving themes for triage

sagehrke added super ticket (epic) and removed super ticket (epic) labels

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