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Migrate CI to GitHub Actions #8

Merged
merged 2 commits into from
Apr 5, 2022
Merged

Migrate CI to GitHub Actions #8

merged 2 commits into from
Apr 5, 2022

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j23414
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@j23414 j23414 commented Apr 4, 2022

Hi @lmoncla, this is just updating our pathogen CI from .travis to GitHub Actions. It shouldn't affect the way you run the pipeline but will maintain consistency in CI testing between our pathogen pipelines (zika, measles, ...). Please feel free to msg me if you have any questions!

Otherwise for more details:

See

This has been modified to the cusomized avian flu parameters but may be harmonized with the zika, measles, and dengue builds later.

nextstrain build --docker . auspice/flu_avian_h5n1_ha.json

Testing

Or feel free to look at the nextstrain build ... output at:

See

 - nextstrain/zika#16
 - nextstrain/zika#17
 - nextstrain/.github#13

This has been modified to a cusomized avian flu parameters but may be harmonized with the zika, measles, and dengue builds later.
@j23414 j23414 requested review from lmoncla, tsibley and victorlin April 4, 2022 16:54
@j23414 j23414 self-assigned this Apr 4, 2022
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Co-authored-by: Thomas Sibley <tom@zulutango.org>
@j23414 j23414 requested a review from tsibley April 5, 2022 14:55
@j23414 j23414 merged commit 6f2c232 into nextstrain:master Apr 5, 2022
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3 participants