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Duplicated parameter setting line in the main workflow #1090

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SPPearce opened this issue Jun 9, 2023 · 1 comment

Contributor

SPPearce commented Jun 9, 2023

The main workflow has the following line duplicated twice:

sarek/workflows/sarek.nf

Lines 149 to 150 in 6c0d335

    
           known_snps         = params.known_snps         ? Channel.fromPath(params.known_snps).collect()        : Channel.value([]) 
        
           known_snps         = params.known_snps         ? Channel.fromPath(params.known_snps).collect()        : Channel.value([])

Either this is just a duplication and can be deleted or one line should be a different parameter.

Contributor Author

SPPearce commented Jun 9, 2023

Maxime has opened a PR to fix at #1089

maxulysse closed this as completed

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