Skip to content

Releases: DigitalSlideArchive/HistomicsUI

v1.6.0

13 Aug 17:31
31e698b
Compare
Choose a tag to compare

What's Changed

  • Reduce undesired root logging. by @manthey in #374
  • Allow getting plugin resources by @manthey in #375
  • Report the user that started the job on the job details page. by @manthey in #376
  • Support violin plots in the Metadata Plot panel by @manthey in #379
  • Adjust formatting by @manthey in #380
  • Adjust how violin plots are presented. by @manthey in #381
  • More adjustments to violin plots by @manthey in #382
  • Tweak some css for long axis names on the frame selector by @manthey in #384
  • Add a setting to adjust the login message. by @manthey in #385
  • Don't show the context menu when finishing an annotation. by @manthey in #386
  • Harden drawing annotations. by @manthey in #387
  • Add an admin endpoint for querying files. by @manthey in #389
  • Harden switching annotation modes by @manthey in #390
  • Adjust position and z-index of region control dropdown by @gabrielle6249 in #391
  • Show a loading spinner until the image is ready. by @manthey in #392
  • Use new plottable data endpoints from large_image by @manthey in #394
  • Increase size of loading spinner by @manthey in #396
  • Fix an issue with the distinct plottable list color by @manthey in #397
  • Have the plot automatically respond to toggling annotation visibility by @manthey in #398
  • Harden annotation refreshes with plottable data by @manthey in #399
  • Improve plots by @manthey in #400
  • Update plotly and how selections are handled. by @manthey in #403
  • Don't reload plot data if it hasn't changed by @manthey in #404
  • Update plottable data to match changes in large_image. by @manthey in #405
  • Reduce console warning on plot hover by @manthey in #406
  • Don't show decimal places on integers by @manthey in #407
  • Limit length of text in hover info on plots by @manthey in #408

New Contributors

Full Changelog: v1.5.0...v1.6.0

Version 1.5.0

01 Feb 21:09
2421641
Compare
Choose a tag to compare

What's Changed

  • Show updated details on annotation popovers. by @manthey in #329
  • Add annotation element metadata to the popover. by @manthey in #330
  • Fix a bug when changing style groups. by @manthey in #332
  • Fix an issue with the select control update by @manthey in #333
  • Make annotation access levels more consistent with other models by @manthey in #340
  • Support default annotation visibility. by @manthey in #341
  • Allow panels to be configure via .histomicsui_config.yaml. by @manthey in #342
  • Fix saving annotation color by @manthey in #343
  • Configurable dark mode by @manthey in #344
  • Make some settings on the annotation panel configurable. by @manthey in #346
  • Fix a z-index issue in dark mode. by @manthey in #347
  • Support more region shapes by @manthey in #349
  • Fix z-index of drop down region menu. by @manthey in #350
  • Update max-merge css for frame selector by @manthey in #352
  • Fix a typo in a css selector by @manthey in #353
  • Serialize nans as nulls during rest json responses. by @manthey in #356
  • To make it easier to deploy in an Iframe, allow token auth. by @manthey in #358
  • Show resource paths in girder search pages. by @manthey in #367
  • Support short login sessions. by @manthey in #369
  • Add a guard to checking the token. by @manthey in #370
  • Reduce undesired root logging. by @manthey in #373

Full Changelog: v1.4.6...v1.5.0

Version 1.4.6

16 Aug 20:49
b569c46
Compare
Choose a tag to compare

What's Changed

  • Update frame selector help. by @manthey in #318
  • Sometimes canceling style changes didn't close the dialog by @manthey in #319
  • A minor css change for the frame selector preset by @manthey in #324
  • Use the large_image max_annotation_input_file_length setting. by @manthey in #327

Full Changelog: v1.4.5...v1.4.6

Version 1.4.5

03 Jul 14:46
bb7c47c
Compare
Choose a tag to compare

What's Changed

  • Fix a download scope issue by @manthey in #311
  • Avoid linting files we shouldn't by @manthey in #312
  • Adjust styles of frame selector based on recent changes in large image by @manthey in #313
  • Tweak some css values for the frame selector by @manthey in #316
  • Better update annotations when they change from external causes by @manthey in #317

Full Changelog: v1.4.4...v1.4.5

Version 1.4.4

13 Jun 12:37
02f03fc
Compare
Choose a tag to compare

What's Changed

  • Pass itemId to the frame selector by @manthey in #309
  • Update the metadata widget to inherit from large_image by @manthey in #310

Full Changelog: v1.4.3...v1.4.4

Version 1.4.3

05 Jun 12:35
faecf30
Compare
Choose a tag to compare

What's Changed

  • Apply configurable sort to next and previous images by @manthey in #288
  • Expose the frame selector as a new panel by @manthey in #294
  • Remove some debug statements. by @manthey in #298
  • Adjust panel title css to avoid overflow by @manthey in #300
  • Don't attempt to fetch user collections if anonymous. by @manthey in #301
  • Handle the mousedown event for better overlay processing. by @manthey in #304
  • Remove a useless log message by @manthey in #305

Full Changelog: v1.4.2...v1.4.3

Version 1.4.2

27 Mar 15:53
4fd11f1
Compare
Choose a tag to compare

What's Changed

  • Speed up item list updates. by @manthey in #258
  • Add hooks to add details to annotation popovers. by @manthey in #260
  • Add some missing endpoint scopes. by @manthey in #262
  • Use folder metadata in metadata plots. by @manthey in #264
  • Fix typo in girder-worker command invocation by @zachmullen in #268
  • Update the handler for annotation size. by @manthey in #271
  • Allow click to select a single element. by @manthey in #273
  • Don't reload plotly if already present by @manthey in #274
  • Allow selecting elements by polygon by @manthey in #275
  • Fix a bug where elements wouldn't update immediately. by @manthey in #276
  • Color annotations by metadata. by @manthey in #279
  • Selecting annotations and draw mode are exclusive. by @manthey in #280
  • Add select-by-group controls to the draw widget. by @manthey in #281
  • Deactivate annotations when they are hidden. by @manthey in #282
  • Deselect elements when they are hidden. by @manthey in #283
  • Deselect elements on image transition. by @manthey in #284
  • Don't change the color radio button needlessly. by @manthey in #285
  • Prevent side panels from having horizontal scrollbars. by @manthey in #286

New Contributors

Full Changelog: v1.4.1...v1.4.2

Version 1.4.1

06 Jan 00:16
88e8b1e
Compare
Choose a tag to compare

What's Changed

  • Minor tweak to panel zone css. by @manthey in #242
  • Use open.read rather than download to access files in Girder. by @manthey in #244
  • Optionally relax restricting downloads for small files. by @manthey in #247
  • Improve metadata and annotation reference handling. by @manthey in #248
  • Assetstore maintenance by @manthey in #250
  • Pin tinycolor2 by @manthey in #256

Full Changelog: v1.4.0...v1.4.1

Version 1.4.0

16 Sep 14:32
79cf689
Compare
Choose a tag to compare

What's Changed

  • Add support for drawing polygon regions by @manthey in #126
  • Update CI image. by @manthey in #131
  • Ellipse and circle annotations by @manthey in #132
  • Add pixelmap interactivity by @naglepuff in #130
  • Set coordinates display z index. by @manthey in #133
  • Add setuptools_scm to the tox requirements. by @manthey in #134
  • Better clear tooltips. by @manthey in #136
  • Add an endpoint to find a json config file. by @manthey in #138
  • Explicitly order next and previous item buttons by @manthey in #139
  • Add an option to remove annotation files after ingest. by @manthey in #144
  • Don't close dialog when dragging outside of it by @mvandenburgh in #149
  • Revert "Generalize the mousedown behavior for all modals" by @manthey in #151
  • Documentation improvements by @mvandenburgh in #153
  • Don't close dialog when dragging outside of it (take 2) by @mvandenburgh in #152
  • Add keyboard shortcut to start/stop drawing annotation by @mvandenburgh in #154
  • Add keyboard shortcuts to pick the style group by @mvandenburgh in #155
  • Add keyboard shortcut for saving polygon/line annotations by @mvandenburgh in #157
  • Set tabindex of all dialog buttons by @mvandenburgh in #158
  • Fix create annotation keyboard shortcut bug by @mvandenburgh in #160
  • Remove the json config route. by @manthey in #161
  • Specify a background color for the brand in the title bar by @manthey in #162
  • Add an endpoint to restart the system. by @manthey in #164
  • Add an endpoint to allow admins to clean up old abandoned jobs. by @manthey in #165
  • Handle annotation boolean operations by @manthey in #166
  • Speed up adding annotation elements. by @manthey in #167
  • Document some of the mouse and keyboard controls. by @manthey in #168
  • Illustrate boolean operations. by @manthey in #169
  • Improve aggregating groups. by @manthey in #170
  • Fix an issue showing the metadata panel maximized. by @manthey in #171
  • Refocus the main image after using the context menu. by @manthey in #172
  • Reduce updates when modifying annotations. by @manthey in #173
  • Replace the 'Open in Histomics UI' menu item with a button by @eagw in #175
  • Create links from hierarchy widget to images in Histomics UI by @eagw in #176
  • Make long image annotation label titles wrap properly by @eagw in #178
  • Fix initial popover position. by @manthey in #179
  • Reduce updates on zoom changes. by @manthey in #181
  • Add feature to zoom to highlighted annotations in 'Interactive Mode' by @eagw in #180
  • Add Vue component for editing Heatmap and Griddata annotation elements by @naglepuff in #182
  • Add brush controls by @manthey in #184
  • Update control documentation and brush function descriptions. by @manthey in #185
  • Add some tests for the brush. by @manthey in #186
  • Change the key bindings for changing brush size. by @manthey in #188
  • Fix an issue when switching annotations and editing. by @manthey in #189
  • Allow virtual folders to form resource paths by @manthey in #191
  • Fix highlighting the active annotation. by @manthey in #192
  • Use a screen-relative pixel tolerance. by @manthey in #194
  • Pin vue and vue-template-compiler. by @manthey in #196
  • Add element count for annotation/group combinations by @eagw in #198
  • Add webapck alias for vue by @naglepuff in #205
  • Speed up select by region by reducing backbone events. by @manthey in #206
  • Add an endpoint to get default settings. by @manthey in #207
  • Harden annotation spec test. by @manthey in #208
  • Show color picker to the side by @naglepuff in #209
  • Add dropdown to enable drawing shapes with fixed aspect ratios/sizes by @mvandenburgh in #197
  • Add optional help button by @eagw in #203
  • Add internal pixelmap count to annotation/group count by @eagw in #204
  • Refactor how controls are found and modified. by @manthey in #213
  • Don't show open in histomics icon in dialogs. by @manthey in #214
  • Click buffer of 10px - missing annotations by @ds2268 in #210
  • Fix some white-space issues. by @manthey in #219
  • Allow flake8 to be an implied dependency. by @manthey in #220
  • Add more descriptive element labels by @naglepuff in #216
  • Better invalidate JS and CSS caches. by @manthey in #221
  • Use new annotation creation access flag by @eagw in #222
  • Fix issue with panel layout from new access flag use (PR #222) by @eagw in #223
  • If an annotation element has a specified label, don't modify it. by @manthey in #224
  • Generalize not closing modals when the mouse is dragged outside of it by @manthey in #227
  • Support changing annotation groups based on a config file. by @manthey in #228
  • Adjust based on proper value array length by @manthey in #229
  • Reduce how often the new annotation button updates. by @manthey in #231
  • Reduce how often the new annotation button updates by @manthey in #232
  • Improve visual refresh speed during saves. by @manthey in #233
  • Fix setting the default group in one spot. by @manthey in #234
  • Add appropriate information for relative path parameters. by @manthey in #235
  • Fix counts for some labeled groups. by @manthey in #237
  • Harden heatmap dialog. by @manthey in #238
  • Show annotation created and updated times and the annotation id. by @manthey in #239
  • Harden not closing modals when the mouse is dragged outside of it by @manthey in #240
  • Support annotation metadata by @manthey in #241

New Contributors

Read more

Version 1.3.0

15 Feb 17:46
1bdcd05
Compare
Choose a tag to compare

Features

  • Add support for image overlays

Improvements

  • Handle annotations with girderId references.