LORIS Release v26.0.4

What's Changed

• [EEG Browser] Viz loading issue by @laemtl in #9527
• Post install script fix by @laemtl in #9524

Full Changelog: v26.0.3...v26.0.4

LORIS Release v26.0.3

What's Changed

• [SQL] remove DownloadPath from sql files - 26.0-release by @kongtiaowang in #9467
• [electrophysiology_uploader] Fix minor unexpected behaviours by @ZhichGaming in #9470
• [composer] manage project dependencies by @regisoc in #9496
• [Deprecated DQT] Fix type error in demographic import script by @driusan in #9508
• [Raisinbread] Add physiological_event_archive entries by @jeffersoncasimir in #9515
• [Candidate] RE-add support to create candidates from the backend (unix user) by @ridz1208 in #9485
• [issue_tracker] Add [priority,status] in the body and 'study' to subj… by @shonibare in #9471
• [EEG Browser] Fix webpack and ts config by @laemtl in #9517

New Contributors

• @ZhichGaming made their first contribution in #9470

Full Changelog: v26.0.2...v26.0.3

LORIS Release v26.0.2

What's Changed

• [dictionary] optimize unique scan types by @regisoc in #9454
• [Examiner] fix missing edit examiner url-link by @kongtiaowang in #9449
• [candidate_list] Fix 'Access Profile' link on timepoint list page by @shonibare in #9455
• [Feedback] Fix typo in getSummaryOfThreads by @CamilleBeau in #8889

Full Changelog: v26.0.1...v26.0.2

LORIS Release v26.0.1

What's Changed

• fix data release sort issue by @kongtiaowang in #8636
• [MRI Violations] Fix violated_scans_view_allsites permission by @laemtl in #9057
• [statistics] Fix bracket for null coalesce by @driusan in #9310
• fix generic_includes.php returning error "Undefined variable in /var/www/loris/tools/generic_includes.php on line 28" - 26 branch by @cmadjar in #9317
• [candidate parameters] diagnosis fix by @kongtiaowang in #9365
• fix generic_includes.php returning error "Undefined variable in /var/www/loris/tools/generic_includes.php on line 28" - 25 branch by @cmadjar in #9318
• [API] Fix PUT request not updating image's QC values by @cmadjar in #9376
• [dataquery/instruments] Handle cardinality::many instruments in DQT by @driusan in #9305

Full Changelog: v26.0.0...v26.0.1

LORIS Release v26.0.0

This is the LORIS v26.0.0 release. It includes many major new features such as a rewritten Data Query Tool that doesn't require CouchDB and enforces permissions, preliminary OpenID Connect support, HED tag support in the EEG browser, a new scheduling module, a candidate diagnosis evolution tracker, the ability to customize the "Sex" options for candidates in LORIS, PHP 8.3 support, and multiple bug fixes and optimizations.

For the full changelog see: v25.0.2...v26.0.0

Upgrade Instructions

To upgrade LORIS from v25.0.x (previous versions should first upgrade to v25):

1. Update to the v26.0.0 version of the code.
2. Run the SQL update patch SQL/Release_patches/25.0_To_26.0_upgrade.sql.
3. Run the command make from your LORIS root directory.

What's Changed

• [Tools] Generate tables include path fix by @laemtl in #8674
• [LINST] Add .meta option to skip XIN rules by @driusan in #8714
• [candidate_list] Multiselect for visit label, site, and cohort by @charlottesce in #8730
• [candidate_parameters] Participant status - mandatory comments if not active or complete by @charlottesce in #8731
• [api] Add cohorts to project info by @driusan in #8774
• [conflict_resolver] Add description field by @charlottesce in #8845
• [DataQuery] New DQT backend implementation by @driusan in #8268
• [IssueTracker] Fix for "othersWatching" history tracking by @sanjay-thiyagarajan in #8875
• [JS] Add username/id to Loris helper object by @driusan in #8876
• [OpenID] Add OpenID Connect support to LORIS by @driusan in #8255
• [script] Add script to create a new module by @driusan in #8918
• [Core] Allow module entrypoint to be written in typescript by @driusan in #8873
• [SQL] Require test_names.Sub_group to not be null by @driusan in #8933
• [instruments] Bulk load SessionID and VisitLabel by @driusan in #8855
• [CouchDB_MRI_Importer] Remove extra argument in _getQueryForSelectedFiles by @CamilleBeau in #8947
• [NDB_BVL_Instrument] Cleanup duplicate method definition for _addMetadataFields() by @zaliqarosli in #8956
• Remove 'Scan done' field from 'Start visit' menu by @GeorgeMurad in #8955
• feat: add robots.txt file by @divyakelaskar in #8946
• [Tools] fix timepoint data problems by @xlecours in #8949
• [bvl_feedback] Update summary in real time by @CamilleBeau in #8966
• [examiner] Only show active examiner sites by @CamilleBeau in #8967
• [dataquery] New Data Query Module by @driusan in #8907
• [api/instruments] Add endpoint that allows you to add instruments to a battery by @driusan in #8868
• [New Feature] Tracking and Configuration of Candidate's Diagnosis Evolution by @jesscall in #7560
• [Brainbrowser] file_url query param by @laemtl in #8335
• [jsx] Remove DynamicDataTable by @driusan in #8993
• [Candidate_parameters] Consent status - Add NA option by @charlottesce in #8732
• [candidate_parameters] use DoB and DoD format by @CamilleBeau in #9001
• [my_preference] Add support for my_preference widgets by @driusan in #8938
• Add PHP 8.3 support by @driusan in #9019
• [Instrument List] Show Timepoint Project by @skarya22 in #9039
• [candidate] Create Sex table and remove Sex enum by @CamilleBeau in #9025
• [Instrument List] Refresh on Stage Update by @skarya22 in #9040
• [User Accounts] Site as multi select by @sruthymathew123 in #9022
• [electrophysiology_browser] Replace Physiological Annotations with Events by @jeffersoncasimir in #9032
• [htaccess] Modifies rule to allow spaces in filename when downloading files. by @racostas in #9029
• [electrophysiology_browser] Revised EEG filters + Store reference fix by @jeffersoncasimir in #9038
• [Instrument_list] Refresh on Send to DCC by @skarya22 in #9072
• [install] fix db installer host name by @maximemulder in #9107
• [electrophysiology_uploader] Add PSCID and Visit Label filters to data table by @jeffersoncasimir in #9113
• [help] fix the help widget extending over the height of a page by @shonibare in #9105
• Increase LINST instrument read buffer by @regisoc in #9117
• [dicom archive] Fix dicom archive details links by @maximemulder in #9081
• [data_release] refactoring to use data framework. by @racostas in #9051
• [candidate_profile] Fixing the display of cohorts in candidate Info card by @GeorgeMurad in #9125
• [tools/script] fix projectID issue by @kongtiaowang in #9069
• [user] Add getSites functions in User class by @CamilleBeau in #9102
• [configuration] Fix option deletion issue. by @racostas in #9121
• [electrophysiology_browser] HED Tag Support by @jeffersoncasimir in #9033
• [api_docs] add ModuleID to permission by @ridz1208 in #9145
• [NDB_Client] Allow loading images from images.loris.ca by @jeffersoncasimir in #9161
• [media] bug fix - string to int by @kongtiaowang in #9156
• [instrument_manager] Fixing error in generate_tables_sql_and_testNames tool by @AlexandraLivadas in #9157
• [electrophysiology_browser] Minor HED display modifications by @jeffersoncasimir in #9166
• [issue_tracker] null option assignee by @regisoc in #9169
• EEGVisEnabled check issue and webpack cache by @laemtl in #9159
• [imaging browser] Remove unused button by @maximemulder in #9075
• [statistics] bug fix - projectID issue by @kongtiaowang in #9170
• [Login] password reset page- missing element import by @kongtiaowang in #9171
• [Publication] Fix deletion of file when editing project by @CamilleBeau in #9181
• [Statistics] Fix checkbox places in Imaging Statistics by @miladheshmati in #9184
• [document_repository] Uploading file too large not reporting correctly #9158 - fix by @kongtiaowang in #9174
• [examiner] fix error message display format by @shonibare in #9176
• [new_profile] Site not selected when recruiting another candidate by @nicolasbrossard in #9197
• [Behavioural_QC] Display profile level feedbacks by @CamilleBeau in #9192
• [Schedule Module] add new schedule module into Loris by @kongtiaowang in #6150
• [notification] Fix sender name in email by @maximemulder in #9203
• [publication] Fix number of files in Upload tab by @CamilleBeau in #9179
• [statistics] Recruitment graph optimization by @driusan in #9196
• [Publication] Fix for auto-selecting Project in edit by @skarya22 in #9187
• [media] 413 error improperly handled #9163 - fix by @kongtiaowang in #9175
• [publication] Fix download prevention by overriding download notification function by @jeffersoncasimir in #9208
• [Publication] Fix baseurl missing from emails by @skarya22 in #9186
• Help UI fix by @laemtl in #9210
• [candidate_list] Make candidate_list use LORIS streamable binary format by @driusan in #9195
• Add to configuration server_processes_manager module by @GeorgeMurad in #9189
• [RB_files] Removed erroneous insertions in RB_physiological_file by @jeffersoncasimir in #9211
• [Acknowledgements] Fix for selecting all roles by @skarya22 in #9209
• [dicom archive] Remove superfluous newline in dicom archive view details by @maximemulder in #9214
• data_dictionary_builder.php unique constraint fix by @laemtl in #9201
• [behavioural_qc ] Auto-open behavioural panel with query parameter by @jeffersoncasimir in #9183
• [examiner] Adds permission check when add...

LORIS Release v24.1.7

Backport fixes from v25 to v24.1

What's Changed

• [issue_tracker] Fix inactive user query by @CamilleBeau in #8904
• [instrument_list] Fix deprecation warning (24.1) by @regisoc in #9053

Full Changelog: v24.1.6...v24.1.7

LORIS Release v25.0.2

What's Changed

• [media] React Warning on Upload Tab by @skarya22 in #8721
• [issue_tracker] Do not display inactive users in issue form by @charlottesce in #8841
• [LINST] skip metadatafields for surveys by @zaliqarosli in #8961
• [dictionary] Fixes for correct displaying "Data Type" column for the enumeration type in the "Data Dictionary (Beta)" table by @yagurdmitriy in #8976
• [tools] Fix efficiency of fix_candidate_age script by @CamilleBeau in #8992
• [media] fixes issue when media module try to instantiate a non existing instrument. by @racostas in #8903
• [instrument_list] Fix deprecation warning by @driusan in #8867
• [LINST] fix survey and date issues by @ridz1208 in #8858
• [JSX] Modal Width Prop by @skarya22 in #8893
• [libraries] Get examiner sites by UserID by @CamilleBeau in #8994
• [genomic_browser] Download button not showing up in the Files tab by @ridz1208 in #8480
• [issue_tracker - raisinbread/tools] Fix issue tracker history wrong module ID by @zaliqarosli in #8677
• [Issue Tracker] Issue Change Notifications by @skarya22 in #8885
• [behavioural_qc] fixes visitLevel feedback not showing up. by @racostas in #8900
• [battery_manager] Update Test Plan by @skarya22 in #8782

New Contributors

• @yagurdmitriy made their first contribution in #8976

Full Changelog: v25.0.1...v25.0.2

LORIS Release v24.1.6

What's Changed

• [issue_tracker] Do not display inactive users in issue form by @charlottesce in #8841
• [LINST] skip metadatafields for surveys by @zaliqarosli in #8961
• [tools] Fix efficiency of fix_candidate_age script by @CamilleBeau in #8992
• [media] fixes issue when media module try to instantiate a non existing instrument. by @racostas in #8903
• [LINST] fix survey and date issues by @ridz1208 in #8858
• [JSX] Modal Width Prop by @skarya22 in #8893
• [libraries] Get examiner sites by UserID by @CamilleBeau in #8994
• [genomic_browser] Download button not showing up in the Files tab by @ridz1208 in #8480
• [issue_tracker - raisinbread/tools] Fix issue tracker history wrong module ID by @zaliqarosli in #8677
• [Issue Tracker] Issue Change Notifications by @skarya22 in #8885
• [behavioural_qc] fixes visitLevel feedback not showing up. by @racostas in #8900

Full Changelog: v24.1.5...v24.1.6

LORIS Release v25.0.1

This includes all bug fixes from the v24.1.5 release, pushed forward into a v25.0.1 release.

In particular, it includes the security fix from #8908

What's Changed

• [API] Using isAccessibleBy on candidate endpoint by @xlecours in #8824
• [25.0 release] Update raisinbread dataset by @ridz1208 in #8843
• [25.0 Release] Hotfixes for demo by @ridz1208 in #8840
• [imaging_qc] Improve Error Message by @skarya22 in #8779
• [survey_accounts] notices, warnings and filter options by @ridz1208 in #8859
• [LorisForm] add required to checkboxes by @ridz1208 in #8860
• [Libraries] Feedback panel - fix fieldnames setting by @charlottesce in #8848
• [tools][CouchDB_MRI_Importer] Fix date in MRI data by @charlottesce in #8851
• [issue_tracker] Resolves special characters in titles by @charlottesce in #8842
• [LINST/Dictionary] Add Numeric elements to dictionary by @driusan in #8869
• [bvl_feedback] Edit comment section by @skarya22 in #8790
• [Core] Enable use of project modules for ajax requests by @jeffersoncasimir in #8870
• [imaging_uploader] Fix auto-populating VisitLabel by @zaliqarosli in #8881
• [Dict] hotfix add hidden fields to dictionary implementation by @ridz1208 in #8882
• [Configuration] Fix values of email fields by @laemtl in #8891
• [configuration] Escape values in config module by @driusan in #8901
• [media] Fix SQL injection by @driusan in #8908

Full Changelog: v25.0.0...v25.0.1

LORIS Release v24.1.5

This fixes a variety of bugs found since v24.1.4. Most importantly, it includes a fix for a potential SQL injection attack in the media module. (PR #8908)

What's Changed

• [battery_manager] use visit controller to fetch visit list by @ridz1208 in #8485
• [Core] PSCID uniqueness by @xlecours in #8411
• [API] Using isAccessibleBy on candidate endpoint by @xlecours in #8824
• [survey_accounts] notices, warnings and filter options by @ridz1208 in #8859
• [LorisForm] add required to checkboxes by @ridz1208 in #8860
• [Libraries] Feedback panel - fix fieldnames setting by @charlottesce in #8848
• [tools][CouchDB_MRI_Importer] Fix date in MRI data by @charlottesce in #8851
• [issue_tracker] Resolves special characters in titles by @charlottesce in #8842
• [LINST/Dictionary] Add Numeric elements to dictionary by @driusan in #8869
• [imaging_uploader] Fix auto-populating VisitLabel by @zaliqarosli in #8881
• [Dict] hotfix add hidden fields to dictionary implementation by @ridz1208 in #8882
• [Configuration] Fix values of email fields by @laemtl in #8891
• [media] Fix SQL injection by @driusan in #8908

Full Changelog: v24.1.4...v24.1.5