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Easyconfigs merge sprint 20150603
Kenneth Hoste edited this page Jun 3, 2015
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29 revisions
| Name | Affiliation | Location | GitHub | IRC |
|---|---|---|---|---|
| Balazs | VUB | .be | @hajgato | vschajgato |
| Bart | VUB | .be | @Bart-CER | ? |
| Fotis | freelance | .be/.uk | @fgeorgatos | fotis* |
| Kenneth | HPC-UGent | .be | @boegel | boegel |
| Lumír | VSB | .cz | @jas02 | jas02 |
| Markus | JSC | .de | @geimer | geimer |
| Pablo | SIB | .ch | @pescobar | pescobar |
| Robert | OHRI | .ca | @rjeschmi | rjeschmi |
| Thekla | CyI | .cy | @tloizou | ? |
| Slot (CET) | People |
|---|---|
| 8am - 9am | Balazs |
| 9am - 10am | Balazs, Kenneth, Lumír, Pablo |
| 10am - 11am | Balazs, Kenneth, Lumír, Pablo, Thekla |
| 11am - 12pm | Balazs, Kenneth, Lumír, Thekla |
| 12pm - 1pm | Balazs, Kenneth, Lumír, Markus, Thekla |
| 1pm - 2pm | Balazs, Fotis, Kenneth, Lumír, Markus, Thekla |
| 2pm - 3pm | Balazs, Fotis, Kenneth, Lumír, Markus, Robert |
| 3pm - 4pm | Balazs, Fotis, Kenneth, Lumír, Robert |
| 4pm - 5pm | Balazs, Fotis, Kenneth, Lumír, Pablo, Robert |
| 5pm - 6pm | Fotis, Kenneth, Pablo, Robert |
| 6pm - 7pm | Fotis, (Kenneth) |
| 7pm - 8pm | Fotis, |
| 8pm - 9pm | Kenneth |
| 9pm - 10pm | Kenneth |
| 10pm - 11pm | Kenneth |
- merging PRs: Kenneth
- test reports: Balazs, Robert, (Kenneth)
- reviewing: Balazs, Fotis, Robert
- make own PRs eligible: Bart, Balazs, Markus, Lumir, Pablo, Robert, Thekla
https://github.com/hpcugent/easybuild-easyconfigs/pulls/hajgato
low-hanging fruit:
PostgreSQL (https://github.com/hpcugent/easybuild-easyconfigs/pull/1066)- CUDA (https://github.com/hpcugent/easybuild-easyconfigs/pull/1087)
- Unison (https://github.com/hpcugent/easybuild-easyconfigs/pull/1128) [on hold, https://github.com/hpcugent/easybuild-easyconfigs/pull/1056 should go in first]
ncdf (https://github.com/hpcugent/easybuild-easyconfigs/pull/1185)NWChem (https://github.com/hpcugent/easybuild-easyconfigs/pull/1188)HTSeq (https://github.com/hpcugent/easybuild-easyconfigs/pull/1195)- DEXSeq R package (https://github.com/hpcugent/easybuild-easyconfigs/pull/1204)
Circuitscape (https://github.com/hpcugent/easybuild-easyconfigs/pull/1222)netCDF (https://github.com/hpcugent/easybuild-easyconfigs/pull/1433)GLPK (https://github.com/hpcugent/easybuild-easyconfigs/pull/1499)HMMER (https://github.com/hpcugent/easybuild-easyconfigs/pull/1575)
difficult ones:
- Chombo and BISICLES (https://github.com/hpcugent/easybuild-easyconfigs/pull/1053)
- OpenFOAM (https://github.com/hpcugent/easybuild-easyconfigs/pull/1166)
- wxPython (https://github.com/hpcugent/easybuild-easyconfigs/pull/1223)
- GATE, Geant4, ROOT, CLHEP (https://github.com/hpcugent/easybuild-easyconfigs/pull/1439)
- Mesa (https://github.com/hpcugent/easybuild-easyconfigs/pull/1618)
- requires eudev (https://github.com/hpcugent/easybuild-easyconfigs/pull/1578) and LLVM-core (https://github.com/hpcugent/easybuild-easyconfigs/pull/1620)
- sort of related: https://github.com/hpcugent/easybuild-easyconfigs/pull/1226
https://github.com/hpcugent/easybuild-easyconfigs/pulls/fgeorgatos
life sciences, bioinformatics; PRs by Thekla, Pablo
https://github.com/hpcugent/easybuild-easyconfigs/pulls/boegel
QIIME-related PRs
- OCaml/pplacer: https://github.com/hpcugent/easybuild-easyconfigs/pull/1056
- QIIME + deps: https://github.com/hpcugent/easybuild-easyconfigs/pull/1057
https://github.com/hpcugent/easybuild-easyconfigs/pulls/geimer
- Vampir: https://github.com/hpcugent/easybuild-easyconfigs/pull/512
- Score-P: https://github.com/hpcugent/easybuild-easyconfigs/pull/1026
- Scalasca + deps: https://github.com/hpcugent/easybuild-easyconfigs/pull/1375
- JUBE: https://github.com/hpcugent/easybuild-easyconfigs/pull/1396
https://github.com/hpcugent/easybuild-easyconfigs/pulls/pescobar
- MOSAIK (https://github.com/hpcugent/easybuild-easyconfigs/pull/880)
- PBZIP2 (https://github.com/hpcugent/easybuild-easyconfigs/pull/1038)
- Bioperl (https://github.com/hpcugent/easybuild-easyconfigs/pull/1075)
- Pindel (https://github.com/hpcugent/easybuild-easyconfigs/pull/1126)
- Rpy2 (https://github.com/hpcugent/easybuild-easyconfigs/pull/1149)
- Trinity (https://github.com/hpcugent/easybuild-easyconfigs/pull/1427)
- TopHat (https://github.com/hpcugent/easybuild-easyconfigs/pull/1476)
- MuTect (https://github.com/hpcugent/easybuild-easyconfigs/pull/1483)
- PyMOL/GLEW (https://github.com/hpcugent/easybuild-easyconfigs/pull/1405)
https://github.com/hpcugent/easybuild-easyconfigs/pulls/rjeschmi
Cufflinks (https://github.com/hpcugent/easybuild-easyconfigs/pull/1343, https://github.com/hpcugent/easybuild-easyconfigs/pull/1351)- TopHat (https://github.com/hpcugent/easybuild-easyconfigs/pull/1200)
- Bowtie (
https://github.com/hpcugent/easybuild-easyconfigs/pull/1201, https://github.com/hpcugent/easybuild-easyconfigs/pull/1358)
https://github.com/hpcugent/easybuild-easyconfigs/pulls/tloizou
pBWA (https://github.com/hpcugent/easybuild-easyconfigs/pull/1009)MAT I/O (https://github.com/hpcugent/easybuild-easyconfigs/pull/1004)DendroPy (https://github.com/hpcugent/easybuild-easyconfigs/pull/995)-
ABINIT (https://github.com/hpcugent/easybuild-easyconfigs/pull/727, https://github.com/hpcugent/easybuild-easyconfigs/pull/989)- note (@boegel): should be checked against https://github.com/hpcugent/easybuild-easyconfigs/pull/1551 (and https://github.com/hpcugent/easybuild-easyconfigs/pull/1650)
Bismark (https://github.com/hpcugent/easybuild-easyconfigs/pull/990)