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35 Open 55 Closed
35 Open 55 Closed
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Issues list

Definition of good and bad overlapped read pairs
#91 opened Dec 11, 2023 by SJJHK
Question: Caught exception in calcReferenceMatch on read
#90 opened Nov 6, 2023 by Rhinogradentia
Excessive RAM usage
#89 opened Feb 15, 2023 by royfrancis
6
Paired end data where R1 length =/= R2 length
#88 opened Nov 5, 2022 by dzhang12
Extracting exon and junction coordinates and read/junction count info
#87 opened Jan 11, 2022 by gacatag
Error message: "FATAL ERROR: OutputGtfLine checkFmt: Attribute gene_id not found!
#86 opened Mar 26, 2021 by libj5
Aggregate gene mode in Qorts
#84 opened Nov 9, 2020 by scseekers
Error info: Exception in thread "main" java.util.NoSuchElementException
#83 opened Sep 19, 2020 by royfrancis
How to generate QC.spliceJunctionCounts.novelSplices.txt.gz files
#82 opened Jul 30, 2020 by HeenaBioinfo
2
FATAL ERROR Error info: Exception in thread "main" java.lang.NullPointerException
#81 opened Jun 21, 2020 by IlariaPalmi
1
"IMMPOSSIBLE STATE! FATAL ERROR!" with Hisat2 data - Bioconda installation
#79 opened Apr 23, 2020 by J-Calvelo
5
AUTO GENERATE PLOTS R SCRIPT NOT WORKING
#78 opened Dec 10, 2019 by mya2152
1
java.lang.UnsupportedOperationException: empty.min
#75 opened Jun 22, 2019 by Hrovatin
Get normalized read count for some genomic localizations
#74 opened Apr 16, 2019 by mmagnus
1
ReadPairs_ADV - QC.summary.txt
#72 opened Feb 28, 2019 by bio-la
1
Does QoRTs can take more than one fastq files ?
#70 opened Oct 24, 2018 by paulinefx
1
Empty Counts File
#69 opened Aug 1, 2018 by sanchari24
8
multiple input bam files
#67 opened Jul 31, 2018 by ccshao
2
QoRTs error after aligning with STAR
#66 opened Jul 2, 2018 by ghost
7
Exception in thread "main" java.lang.NoClassDefFoundError
#65 opened Jun 29, 2018 by topherconley
1
QoRTs version 1.30 OutputGtfLine checkFmt: Attribute num not found!
#64 opened Jun 22, 2018 by chelauk
1
SAM Validation Error
#63 opened Jun 20, 2018 by kcornick
Clarification on renamed Single Ended option
#62 opened Apr 20, 2018 by fbearoff
cannot find chromosome in genome FASTA file
#59 opened Mar 21, 2018 by AndrewLangvt
1
long read QC
#57 opened Feb 23, 2018 by ehhill
10
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