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Update subworkflows/local/bam_variant_calling_germline_manta/main.nf
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Co-authored-by: Maxime U Garcia <maxime.garcia@scilifelab.se>
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FriederikeHanssen and maxulysse authored Apr 14, 2023
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Expand Up @@ -28,7 +28,6 @@ workflow BAM_VARIANT_CALLING_GERMLINE_MANTA {

// Only diploid SV should get annotated
// add variantcaller to meta map

vcf = diploid_sv_vcf.map{ meta, vcf -> [ meta + [ variantcaller:'manta' ], vcf ] }

versions = versions.mix(MANTA_GERMLINE.out.versions)
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