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fix config
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maxulysse committed Nov 3, 2023
1 parent 745e415 commit 202ebd9
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion conf/modules/markduplicates.config
Original file line number Diff line number Diff line change
Expand Up @@ -90,7 +90,7 @@ process {
]
}

withName: 'GATK4_MARKDUPLICATES_SPARK' {
withName: 'GATK4SPARK_MARKDUPLICATES' {
ext.args = '--remove-sequencing-duplicates false -VS LENIENT'
ext.prefix = { "${meta.id}.md.cram" }
publishDir = [
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