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add CI for --skip_markduplicates #412

Merged
merged 13 commits into from
Aug 4, 2021
Merged

add CI for --skip_markduplicates #412

merged 13 commits into from
Aug 4, 2021

Commits on Jul 19, 2021

  1. add CI for --skip_markduplicates

    @maxulysse
    maxulysse committed Jul 19, 2021
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  2. fix: typo

    @maxulysse
    maxulysse committed Jul 19, 2021
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  3. fix: merge/index moves from qc_markduplicates to mapping

    @maxulysse
    maxulysse committed Jul 19, 2021
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  4. fix: restart from mapped.csv

    @maxulysse
    maxulysse committed Jul 19, 2021
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Commits on Jul 21, 2021

  1. feat: more tests

    @maxulysse
    maxulysse committed Jul 21, 2021
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  2. fix: add files to tests

    @maxulysse
    maxulysse committed Jul 21, 2021
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Commits on Jul 28, 2021

  1. Merge branch 'dsl2' into dsl2_csv_magic

    @maxulysse
    maxulysse authored Jul 28, 2021
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  2. fix: input

    @maxulysse
    maxulysse committed Jul 28, 2021
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  3. Merge branch 'dsl2_csv_magic' of github.com:maxulysse/nf-core_sarek i… 

    …nto dsl2_csv_magic
    @maxulysse
    maxulysse committed Jul 28, 2021
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Commits on Aug 3, 2021

  1. Merge remote-tracking branch 'upstream/dev' into dsl2_csv_magic

    @maxulysse
    maxulysse committed Aug 3, 2021
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  2. fix: merge conflicts

    @maxulysse
    maxulysse committed Aug 3, 2021
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  3. fix: typo

    @maxulysse
    maxulysse committed Aug 3, 2021
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Commits on Aug 4, 2021

  1. Update subworkflows/nf-core/qc_markduplicates.nf 

    Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
    @maxulysse @FriederikeHanssen
    maxulysse and FriederikeHanssen authored Aug 4, 2021
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