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Alignment to fastq fix and add tests #602

Merged
merged 13 commits into from
Jun 24, 2022
Merged

Alignment to fastq fix and add tests #602

merged 13 commits into from
Jun 24, 2022

Commits on Jun 23, 2022

  1. debug dump

    @ggabernet
    ggabernet committed Jun 23, 2022
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  2. dump channels

    @ggabernet
    ggabernet committed Jun 23, 2022
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  3. fix channel issues

    @ggabernet
    ggabernet committed Jun 23, 2022
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  4. basedir to projectdir

    @ggabernet
    ggabernet committed Jun 23, 2022
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  5. adding test

    @ggabernet
    ggabernet committed Jun 23, 2022
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  6. add bam remap test

    @ggabernet
    ggabernet committed Jun 23, 2022
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  7. add bai input bam to fastq

    @ggabernet
    ggabernet committed Jun 23, 2022
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  8. rm dump

    @ggabernet
    ggabernet committed Jun 23, 2022
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  9. rm dump

    @ggabernet
    ggabernet committed Jun 23, 2022
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  10. add more filest to test

    @ggabernet
    ggabernet committed Jun 23, 2022
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  11. Merge branch 'dev' into bamtofastq

    @ggabernet
    ggabernet authored Jun 23, 2022
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  12. update changelog

    @ggabernet
    ggabernet committed Jun 23, 2022
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  13. Merge branch 'bamtofastq' of https://github.com/ggabernet/nf-core-sarek… 

    … into bamtofastq
    @ggabernet
    ggabernet committed Jun 23, 2022
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