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techdev-project.yml
43 workflow runs
43 workflow runs

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Add marmoset genome and add rule to reformat GTFs missing attributes Add issues/PRs to the TechDev project #43: Pull request #185 opened by kelly-sovacool
December 3, 2024 22:03 15s fix-gtf
fix-gtf
December 3, 2024 22:03 15s
Create a test workflow cronjob Add issues/PRs to the TechDev project #42: Issue #183 opened by kopardev
December 2, 2024 19:23 11s
December 2, 2024 19:23 11s
fix: lowercase SIFs dir Add issues/PRs to the TechDev project #41: Pull request #182 opened by kelly-sovacool
December 2, 2024 16:59 11s sif-cache
sif-cache
December 2, 2024 16:59 11s
new sif images not in cache Add issues/PRs to the TechDev project #40: Issue #181 opened by kelly-sovacool
December 2, 2024 15:59 15s
December 2, 2024 15:59 15s
refactor: simplify bin/redirect Add issues/PRs to the TechDev project #39: Pull request #179 opened by kelly-sovacool
November 27, 2024 03:58 18s refactor-redirect
refactor-redirect
November 27, 2024 03:58 18s
fix: import image_cache() for renee build command Add issues/PRs to the TechDev project #38: Pull request #178 opened by kelly-sovacool
November 26, 2024 21:28 12s fix-cache-import
fix-cache-import
November 26, 2024 21:28 12s
create new reference files for marmoset genome Add issues/PRs to the TechDev project #37: Issue #177 opened by kopardev
November 26, 2024 17:07 12s
November 26, 2024 17:07 12s
fix: upgrade python-based docker containers to use versions with PYTHONPATH unset Add issues/PRs to the TechDev project #36: Pull request #176 opened by kelly-sovacool
November 26, 2024 15:55 12s python-paths
python-paths
November 26, 2024 15:55 12s
RENEE GUI failing Add issues/PRs to the TechDev project #35: Issue #175 opened by samarth8392
November 26, 2024 15:53 12s
November 26, 2024 15:53 12s
upgrade all python dockers Add issues/PRs to the TechDev project #34: Issue #174 opened by kelly-sovacool
November 26, 2024 15:31 12s
November 26, 2024 15:31 12s
fix: upgrade rseqc container Add issues/PRs to the TechDev project #33: Pull request #172 opened by kelly-sovacool
November 25, 2024 18:57 13s rseqc-v3
rseqc-v3
November 25, 2024 18:57 13s
Numpy error in rules inner_distance and RSeQC Add issues/PRs to the TechDev project #32: Issue #171 opened by samarth8392
November 25, 2024 17:40 16s
November 25, 2024 17:40 16s
fix: throw error if too few reads pass the cutadapt filter Add issues/PRs to the TechDev project #31: Pull request #170 opened by kelly-sovacool
November 22, 2024 16:34 1m 0s cutadapt-qc
cutadapt-qc
November 22, 2024 16:34 1m 0s
fix: keep genomic bam Add issues/PRs to the TechDev project #30: Pull request #169 opened by kelly-sovacool
November 22, 2024 15:21 15s keep-bam
keep-bam
November 22, 2024 15:21 15s
chore: delete miniconda container Add issues/PRs to the TechDev project #29: Pull request #168 opened by kelly-sovacool
November 21, 2024 17:00 13s conda-container
conda-container
November 21, 2024 17:00 13s
refactor: consolidate build_cluster.json into main cluster.json Add issues/PRs to the TechDev project #28: Pull request #167 opened by kelly-sovacool
November 7, 2024 12:51 13s iss-125
iss-125
November 7, 2024 12:51 13s
are aws s3 resources downloadable by all? Add issues/PRs to the TechDev project #27: Issue #166 opened by kelly-sovacool
November 4, 2024 21:20 14s
November 4, 2024 21:20 14s
ci: rename main to build Add issues/PRs to the TechDev project #26: Pull request #164 opened by kelly-sovacool
October 25, 2024 15:29 15s ci-build
ci-build
October 25, 2024 15:29 15s
fix: correct renee base path for cache subcommand Add issues/PRs to the TechDev project #25: Pull request #163 opened by kelly-sovacool
October 25, 2024 15:01 16s iss-162
iss-162
October 25, 2024 15:01 16s
renee cache -- broken path to containers Add issues/PRs to the TechDev project #24: Issue #162 opened by kelly-sovacool
October 25, 2024 14:54 11s
October 25, 2024 14:54 11s
Error running renee build for marmoset reference genome Add issues/PRs to the TechDev project #23: Issue #161 opened by nmkuehn
September 30, 2024 17:16 11s
September 30, 2024 17:16 11s
ResourceWarning in v2.6 Add issues/PRs to the TechDev project #22: Issue #160 opened by kelly-sovacool
September 24, 2024 15:18 15s
September 24, 2024 15:18 15s
add debug subcommand Add issues/PRs to the TechDev project #21: Pull request #159 opened by kelly-sovacool
September 19, 2024 17:47 11s print-base
print-base
September 19, 2024 17:47 11s
chore: specify ccbr_tools version v0.1.0 Add issues/PRs to the TechDev project #20: Pull request #157 opened by kelly-sovacool
August 27, 2024 16:59 14s tools-version
tools-version
August 27, 2024 16:59 14s
Update doc website with more FAQs and expect output tab Add issues/PRs to the TechDev project #19: Pull request #156 opened by samarth8392
August 22, 2024 21:23 17s doc-faqs
doc-faqs
August 22, 2024 21:23 17s