v0.10.0

What's Changed

Added

• added documentation from Rd files to code #78
• added tests with realistic testdata for extract_features.R #42, #54
• added tests for feature.align.R (#40), and adjust.time.R (#39)
• added CI to repository's GitHub Actions #45,#49
• added additional test cases for hybrid #133
• added tests and testdata for run_filter.R #156
• merge_features_and_known_table wrapper for augmentation of aligned features and known table #154

Changed

• refactored feature.align.R #63#88#102
• refactored adjust.time.R #64#102
• refactored find.tol.time.R #91
• refactored find.turn.point.R #91
• refactored proc.cdf.R and adaptive.bin.R #137
• refactored cont.index.R and renamed as run_filter.R #156
• use proper sample IDs inside feature tables #153
• exported functions in NAMESPACE #154
• docstrings and documentation files for refactored functions #160
• refactored parameter names to keep them more harmonized #167
• moved some utility functions to a more suitable locations #164

Removed

• extract_features and feature.align #154
• improper usage of @examples #160
• several obsolete utility functions #164
• several outdated .Rd files #168
• default argument values from low-level functions #168