v6.0.16

🧬 Features

• Add ability to spawn code notebooks from cBioPortal queries @gautamsarawagi (#4856)

✨ Enhancements

• Require login for custom data @Nelliney (#5003)
• Add Patient and Sample Resources to Study View @Nelliney (#4961)
• Add organoid icon and color on Patient View @inodb (#4963)

🐛 Bug Fixes

• Add oncoprint gap mode to hide percentages @alisman (#4997)
• Gracefully fail when mutsig missing meta data @alisman (#5000)
• CustomButtons: fix studyName missing when viewing under ResultsViewPage @pappde (#4982)

🎨 Style Tweaks

• Refinements to jupyter modal #10949 @gautamsarawagi (#4968)

👷‍♀️ Testing, Configuration & Deployment

• Update screenshots and api clients @alisman (#4967)

🧰 Maintenance

• move async to async migration home.spec.js mutation-mapper-tool.spec.… @bemijonathan (#4950)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.15...v6.0.16
• Frontend: v6.0.15...v6.0.16

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.15

🧬 Features

• RFC87: add button to load GroupComparison table data in external tool @pappde (#4938)

🧰 Maintenance

• fix localStorage.frontendConfig being clobbered when localhost:3000 testing @pappde (#4955)

📦 Package Improvements

• Update Genome Nexus API client to include Alpha Missense @leexgh (#4962)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.14...v6.0.15
• Frontend: v6.0.14...v6.0.15

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.14

✨ Enhancements

• Show summary stats on homepage @Nelliney (#4952)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.13...v6.0.14
• Frontend: v6.0.13...v6.0.14

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.13

✨ Enhancements

• RFC83: Make virtual study available for all users on their landing pages @forus (#4923)

👷‍♀️ Testing, Configuration & Deployment

• move sync to async for all remote tests @bemijonathan (#4920)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.12...v6.0.13
• Frontend: v6.0.12...v6.0.13

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.12

🐛 Bug Fixes

• Fix submission of patient and sample ids @alisman (#4943)

👷‍♀️ Testing, Configuration & Deployment

• Fix flaky e2e test on patient view line chart @gblaih (#4947)
• Fix e2e tests after microbiome generic assay removed @alisman (#4946)
• Update screenshots after oncokb data and clinical data tab column change @gblaih (#4940)

🧰 Maintenance

• Always show the mutation aligner link for domains @onursumer (#4942)
• Do not use proxy to fetch news @onursumer (#4941)
• WSL setup updates - readme and gitignore for Visual Studio @pappde (#4945)
• Regenerate api clients @alisman (#4944)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.11...v6.0.12
• Frontend: v6.0.11...v6.0.12

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.11

🐛 Bug Fixes

• Fix mutational sig bug @TJMKuijpers (#4930)

🧰 Maintenance

• Move 'juice' inside cbioportal-frontend-commons @leexgh (#4936)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.10...v6.0.11
• Frontend: v6.0.10...v6.0.11

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.10

✨ Enhancements

• Mutational Signature Improvements @alisman (#4916)

🐛 Bug Fixes

• Fix swapping generic assay profiles in comparison view @MatthijsPon (#4922)

📘 Documentation

• add splice mention to oncoprinter docs @inodb (#4935)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.9...v6.0.10
• Frontend: v6.0.9...v6.0.10

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.9

⚙️ Changes to handle external APIs

• Update Genome Nexus API model and reVUE reference to fit new model @leexgh (#4919)

👷‍♀️ Testing, Configuration & Deployment

• Remove demo-rfc72 reference from local e2e test @dippindots (#4928)
• refactored test cases to use async and await @bemijonathan (#4918)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.8...v6.0.9
• Frontend: v6.0.8...v6.0.9

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.8

🐛 Bug Fixes

• Fix LazyMobXTable countHeader when only has 1 page @fuzhaoyuan (#4911)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.7...v6.0.8
• Frontend: v6.0.7...v6.0.8

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v6.0.7

🐛 Bug Fixes

• Study page clinical data tab: fix download after pagination change @alisman (#4912)
• Show all survival attributes and remove duplicates in study clinical data tab @gblaih (#4883)

👷‍♀️ Testing, Configuration & Deployment

• Update screenshots after data change and update to paginated clinical data table @alisman (#4910)
• Fix error logs not displaying error response @gblaih (#4904)

🧰 Maintenance

• Update ts clients and code based on changes to treatment endpoints (moved to internal) @alisman (#4908)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v6.0.6...v6.0.7
• Frontend: v6.0.6...v6.0.7

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning