v4.1.19

✨ Enhancements

• Set data limit and add warning message for study view clinical tab @dippindots (#4343)

🐛 Bug Fixes

• Keep table page as is on row click @onursumer (#4336)

📘 Documentation

• Allow custom href for news pages while handling deprecated .md files @alisman (#4342)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.18...v4.1.19
• Frontend: v4.1.18...v4.1.19

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.18

✨ Enhancements

• Make entire CNA table row clickable and add feature instruction @onursumer (#4334)

👷‍♀️ Testing, Configuration & Deployment

• Stabilize study view generic assay e2e test @dippindots (#4339)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.17...v4.1.18
• Frontend: v4.1.17...v4.1.18

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.17

🐛 Bug Fixes

• Fix IGV sample names displayed next to tracks @onursumer (#4333)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.16...v4.1.17
• Frontend: v4.1.16...v4.1.17

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.16

🐛 Bug Fixes

• Fix default bins when user adjust bins in filter textbox @alisman (#4328)

🧰 Maintenance

• Fix Genomic Alterations tab local crash issue @onursumer (#4327)
• Springfox Upgrade @Luke-Sikina (#4312)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.15...v4.1.16
• Frontend: v4.1.15...v4.1.16

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.15

✨ Enhancements

• Display a detailed error message for invalid molecular profiles @onursumer (#4306)
• Point static links to new docs site @alisman (#4313)

⚙️ Changes to handle external APIs

• Switch to the new uniprot rest API @onursumer (#4316)

👷‍♀️ Testing, Configuration & Deployment

• Fix AnnotationFilteringSettings defaults from portal.properties @pvannierop (#4321)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.14...v4.1.15
• Frontend: v4.1.14...v4.1.15

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.14

🐛 Bug Fixes

• Update pathway mapper version to the latest beta @onursumer (#4309)

📘 Documentation

• Fix default values for md files that were moved @Luke-Sikina (#4311)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.13...v4.1.14
• Frontend: v4.1.13...v4.1.14

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.13

✨ Enhancements

• Oncoprintjs: Add gap change callback so state of gap visibility can be persisted in session @BasLee (#4302)
• Set max for number of categories in Plots tab @pvannierop (#4298)

🐛 Bug Fixes

• Fix checkbox controls above clinical attribute plots @BasLee (#4297)

👷‍♀️ Testing, Configuration & Deployment

• Increase timeout for failing test @alisman (#4308)

🧰 Maintenance

• fix fsevents error @nr23730 (#4301)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.12...v4.1.13
• Frontend: v4.1.12...v4.1.13

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.12

🐛 Bug Fixes

• Fix downloading of heatmap in group comparison clinical tab @BasLee (#4285)
• Fix 3d hotspots svg font family @onursumer (#4303)
• Fix positioning of timeline tooltip when it's on right side of page @alisman (#4296)

📘 Documentation

• Add missing info for setting up dev env @inodb (#4300)

👷‍♀️ Testing, Configuration & Deployment

• Fix download controls localdb tests @onursumer (#4295)

🧰 Maintenance

• Add numeral into the portal commons package dependency @zhx828 (#4294)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.11...v4.1.12
• Frontend: v4.1.11...v4.1.12

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.11

✨ Enhancements

• OncoKB Updates @zhx828 (#4290)
• Show clinical data numerical summary statistics as table @BasLee (#4257)

🐛 Bug Fixes

• Fix color chooser menu state in Group Comparison dropdown of study view @alisman (#4289)

🎨 Style Tweaks

• Fix OncoKB track tooltip Level column text alignment @onursumer (#4291)

👷‍♀️ Testing, Configuration & Deployment

• Update screenshot. Update gitignore to include junit @alisman (#4292)
• Improve local db screenshot @dippindots (#4286)
• try larger resource class @alisman (#4288)

📦 Package Improvements

• Migrate oncoprintjs with its commit history @onursumer (#4266)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.10...v4.1.11
• Frontend: v4.1.10...v4.1.11

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning

v4.1.10

🧬 Features

• Add heatmap to plot options of clinical categorical data @BasLee (#4270)

✨ Enhancements

• Impl. size-dependent request body compression @pvannierop (#4283)

🐛 Bug Fixes

• Fix results view generic assay oncoprint selection issue @dippindots (#4284)
• Don't fetch ndex status unless Pathways tab is active @alisman (#4280)
• Fix plots tab cut off @leexgh (#4276)

🏎 Performance Tweaks

• Improve performance of cancer hotspots utility functions @onursumer (#4274)

📘 Documentation

• add download data video @tmazor (#4272)

👷‍♀️ Testing, Configuration & Deployment

• Update api clients @alisman (#4281)

🕵️‍♀️ Full commit logs

• Backend: cBioPortal/cbioportal@v4.1.9...v4.1.10
• Frontend: v4.1.9...v4.1.10

🏷Notes on versioning and release procedure

https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning