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ZainVirani wants to merge 202 commits intostats_demographic_rework_rebaseZainVirani/Loris:stats_demographic_rework_rebasefrom stats_drr2ZainVirani/Loris:stats_drr2Copy head branch name to clipboard

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Commits on Nov 23, 2017

• Remove unused variable in main.php (aces#3303)

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• Remove table help content which has been moved to markdown (aces#3289)

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Commits on Nov 28, 2017

• Merge remote-tracking branch 'aces/minor' into HEAD

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Commits on Dec 5, 2017

• Remove create_function call from LorisForm (aces#3331)

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Commits on Dec 20, 2017

• Merge remote-tracking branch 'aces/minor' into HEAD

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Commits on Dec 22, 2017

• [Instruments] Remove reference to deprecated PHP function "create_function" (aces#3341)

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Commits on Jan 3, 2018

• [Issue Tracker] Using issue_tracker_url instead of mantis_url (aces#2763)

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Commits on Jan 4, 2018

• [Core] Remove deprecated call to create_function in isPasswordStrong (aces#3340)

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Commits on Feb 8, 2018

• [travis] update to PHP 7.2 (aces#3474)

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• Run composer update (aces#3478)

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Commits on Feb 9, 2018

• [Core-Database] added 2 new functions to help avoid code duplication (aces#3428)

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Commits on Feb 12, 2018

• [Core] Add AnonymousUser class to differentiate logged in from logged out users (aces#3463)

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Commits on Feb 15, 2018

• [Travis] run docker test on php 7.2 for major branch (aces#3488)

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• Readd multiversion testing (aces#3493)

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Commits on Feb 20, 2018

• Add page decoration middleware (aces#3477)

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• New data framework interfaces (aces#3502)

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Commits on Feb 26, 2018

• [Libraries] Remove unused functions from Utility and update cleanup comments (aces#2913)

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• [test/RBdata.sql] insert column names into testing data table. (aces#3481)

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• PSR15 Base Router (aces#3480)

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Commits on Feb 27, 2018

• Merge remote-tracking branch 'aces/19.0-dev' into 2018_02_22_upgrading_major_to_19_take2

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• Fixed issues with branch merger

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• fixing dataset

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Commits on Feb 28, 2018

• remove sleep

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• Merge pull request aces#3517 from ridz1208/2018_02_22_upgrading_major_to_19_take2_FIXES

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• New Data Framework Implementation (Part 2) (aces#3505)

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Commits on Mar 1, 2018

• Fix typos in Data framework classes (aces#3521)

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Commits on Mar 5, 2018

• Run phan as part of Travis (aces#3529)

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• Entrypoint for new router (aces#3513)

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• Fix some phan problems (aces#3533)

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Commits on Mar 12, 2018

• Move localizer exclusion setting into the Config module (aces#3449)

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• DICOM Archive Data Framework (aces#3524)

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• [SQL] Adding directories to separate new patches from clean-up patches from Archives (aces#3531)

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Commits on Mar 16, 2018

• Merge remote-tracking branch 'aces/bugfix' into HEAD

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• Fix VERSION

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Commits on Mar 19, 2018

• Increase phan coverage (aces#3544)

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• Fixed a typo in the config table (aces#3550)

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• Four Fun Phan Fixes (Part 4) (aces#3554)

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Commits on Mar 20, 2018

• Remove unused ajax scripts (aces#3556)

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• Remove flaky test in candidate_list module (aces#3552)

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Commits on Mar 21, 2018

• [tools] Added Tools Directories (aces#3536)

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Commits on Apr 9, 2018

• Remove non-prepared variant of database select wrappers (aces#3553)

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• Fix phan error for major branch (aces#3572)

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Commits on Apr 16, 2018

• [jsx/Form.js] Set id attribute to this.prop.id (aces#3564)

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• [Core] removed support for dynamic user generated visit labels (aces#3209)

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Commits on Apr 18, 2018

• [jsx/Form.js] Reset id attribute of DateElement to this.props.id (aces#3595)

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Commits on May 3, 2018

• Fix signature compatibility errors detected by phan (aces#3631)

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• Merge remote-tracking branch 'aces/minor' into HEAD

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Commits on May 4, 2018

• [Core] Fix the build on the major branch (aces#3640)

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Commits on May 7, 2018

• [Core] Fix errors related to undefined classes detected by phan (aces#3637)

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• stats_behavioural.class.inc setup() function may not initiate and prevent undefined property from ->params (aces#3629)

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• [Dashboard] fix links in incomplete forms (aces#3641)

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• [instrument_manager] Added isset() to check if ['install'] exists (aces#3635)

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Commits on May 9, 2018

• Fix major branch (aces#3650)

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• [Core] Use New Router (aces#3584)

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• Remove unused cookie (aces#3653)

  

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Commits on May 10, 2018

• Phan incorrect param number (aces#3642)

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Commits on May 16, 2018

• [new_profile] Added quotation marks (aces#3667)

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Commits on May 23, 2018

• [core] prevent notice in Instrument class (aces#3682)

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• [Core] Refactor breadcrumbs (aces#3591)

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• [InstallDB] Modifying the check to see whether http or https protocol is being used. (aces#3658)

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• [tools] Removed log warning for data dictionary builder (aces#3680)

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Commits on May 28, 2018

• [API] Displays QC info of MINC images, and allow hyphens in MINC filenames (aces#3670)

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• [Instrument] Fix typo (Depricated --> Deprecated) (aces#3687)

  

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• [README] Change README to say 19.0 release (not 18.0 release) (aces#3686)

  

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• [training] Fix console warning when not setup (aces#3627)

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• [User_accounts] Reject users cleanup (aces#3634)

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• [media] Unathenticated viewing private data fix (aces#3657)

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• Remove HTML_QuickForm as a dependency and update library versions (aces#3659)

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• [Doc Repo] Use singleton for user name (aces#3678)

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• [Candidate_parameters, Core] Normalizing Consent SQL 1/2 (aces#3532)

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Commits on May 29, 2018

• [statistics] Reports statistics demographic statistics warning fix (aces#3628)

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Commits on May 30, 2018

• Remove excessively slow tests (aces#3696)

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Commits on Jun 6, 2018

• [media][document_repository] Fix error with downloading files with names containing '+' (aces#3679)

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Commits on Jun 11, 2018

• [New Profile] Ensure Site object isn't overwritten (aces#3706)

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Commits on Jun 12, 2018

• [conflict_resolver] Restore "Resolved Conflicts" to the correct link instead of redirecting to the main page (aces#3711)

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Commits on Jun 13, 2018

• [NDB_Form] Fix page constructor (aces#3716)

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Commits on Jun 14, 2018

• Merge remote-tracking branch 'aces/minor' into HEAD

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• Merge remote-tracking branch 'aces/bugfix' into HEAD

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• Merge remote-tracking branch 'aces/minor' into HEAD

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• Fix build on release branch

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Commits on Jun 15, 2018

• Phan fix and Travis fix for 20.0-release (aces#3727)

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Commits on Jun 18, 2018

• [php/libraries] Utility.class.inc variable $instruments may not be defined fix (aces#3731)

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• [Candidate_parameters, Core] Implement Normalizing Consent 2/2 (aces#3560)

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• Imaging Browser 20.0 bugfix: Fix links to instruments (aces#3728)

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• Improve error checking for EDC (aces#3718)

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• Fix redirect on user accounts page (aces#3720)

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• [Candidate Parameters] 20.0 fix "Return to timepoint list" button (aces#3733)

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• Update Imaging Browser Readme (aces#3732)

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• Fix phan on 20.0-release branch (aces#3735)

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• [RELEASE] Update main Readme for 20.0 (aces#3737)

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• [install] can't load the installdb.php page - fix typo (aces#3738)

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Commits on Jun 19, 2018

• Remove invalid buttons from timepoint_list page (aces#3724)

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• [Candidate Parameters, Participant Status] Fix NULL form entry saves aces#3736

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• [FilterForm] Handle empty strings / deleted Filter vars (aces#3743)

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• Merge pull request aces#3742 from aces/20.0-release

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Commits on Jun 20, 2018

• Better error message when removing examiner role from user account (aces#3734)

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• [Statistics] (20.0) Update test plan (aces#3750)

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• [Help editor] fix format (aces#3749)

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• [imaging uploader] Fix clear filters button of imaging uploader (aces#3741)

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• Merge pull request aces#3751 from aces/major

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Commits on Jun 21, 2018

• [Statistics] (20.0) Re-enable Behavioural Statistics Double Data Entry module (aces#3752)

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Commits on Jun 26, 2018

• [Candidate_parameters] Update consent doc (aces#3753)

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Commits on Jul 3, 2018

• Remove reference to a function which doesn't exist in NDB_Page (aces#3723)

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• [Help_editor] (20.0) Update test plan (aces#3755)

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• [Help_editor] Add leading zeros to 'Last updated' date format in Preview (aces#3756)

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• [Data Dictionary] Permission Fix For Description Field (aces#3760)

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• [20.0][Create Timepoint] Actually check visit label in validation function (aces#3762)

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• [Media] update test plan (aces#3766)

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• Code Issues 15 Pull requests 73 Projects 4 Wiki Insights Settings [Core] .htaccess - Redirect base URL requests to be routed through index.php (aces#3768)

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• [20.0-testing] Dicom archive: update test plan and change Series UI to SeriesUID (aces#3774)

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• [Data Team Helper] Fix Wrong URL In Instrument Level Behaviour Feedback aces#3772

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• [20.0][Document Repository] Testplan modifications (aces#3776)

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• [Dashboard] BVL Feedback links: fix instrument level links & add visit level links (aces#3773)

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• [install] Bugfix 500 Internal Server Error 20.0-release (aces#3748)

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• [Examiner] add breadcrumb link (aces#3780)

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• [Instruments] Rework breadcrumbs (aces#3781)

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• [Timepoint list] Fix timepoint list duplicate entry in the table (aces#3783)

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• [Examiner] fix menu doesn't exist with examiner_view permission. (aces#3782)

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• [Statistics] Change Gender to Sex in Test Plan (aces#3785)

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• [Examiner] (20.0 Bugfix) Grant permission when user has examiner_multisite or examiner_view (aces#3745)

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• [Statistics] Freeze "Breakdown" table headers when scrolling down (aces#3759)

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• cleanup console output when CouchDB not configured (aces#3630)

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• API Dicom download for phantoms: add missing candID (aces#3787)

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• [Imaging Uploader] Adds validation checks and displays errors on form (now on 20.0-release branch) (aces#3761)

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• [Dashboard] Fix discrepancy in data entry conflicts aces#3775

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• [Instruments] Fix 404 error (aces#3791)

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• [SQL] Creation of Upgrade patch and Archiving of patches (aces#3793)

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• [Release Patch] fix SQL glitches (aces#3801)

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• [Conflict Resolver] Enabling Active Candidate and Active Session Check in Query (aces#3792)

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• [Dicom Archive] Fix site filtering (aces#3805)

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• Added spec/README for conflict resolver module (aces#3375)

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• [Dashboard][20.0] Amend testplan (aces#3822)

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• [20.0][genomic_browser] Correct Typo in Link (aces#3824)

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• [media] Update Test Plan (aces#3826)

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• [jsx] Add required to SearchableDropdown input element aces#3821

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• [Instrument] Remove unused functions (aces#3784)

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• [Candidate_list] Change EDC field to a date field (aces#3823)

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• [Instrument list] Populate the timepoint tpl_data for modules (aces#3799)

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• [Router] check in project modules as well (aces#3827)

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• [create_timepoint] Validation for VisitLabel accessing wrong variable therefore breaks on CCNA (aces#3819)

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• [data_team_helper] Instrument & Site Filters are not holding/displaying the values once it is applied. (aces#3812)

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• [Instrument List] Update test plan (aces#3816)

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• [Instrument Manager] (20.0) Fix bug where LorisException should have been thrown when quatUser was not properly configured, improve error checking (aces#3746)

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• [instrument_builder] Fix error where the value for year was not exactly 4 digits (aces#3769)

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• [Dicom Archive] Markdown-ify Test Plan (aces#3804)

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• [Data Dictionary] Make instruments multi-selectable (aces#3806)

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• [Data Integrity Flag] Fix Clear Filter button (aces#3807)

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• Updates to the MRI violations test plan for 20.0 release (aces#3811)

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• [examiner] Fix permission condition for edit examiner (aces#3817)

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• [Dicom archive] Apply filters dicom achive to mri violations (aces#3830)

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• [Candidate] Sanitize candidate comments (aces#3834)

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• [bvl_feedback] Update test plan (aces#3836)

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• [ Data Team Helper] Corrected the test plan for the module. (aces#3842)

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• Amended the imaging_uploader module test plan. (aces#3845)

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• [survey module] Remove checks for permissions when entring direct data (aces#3848)

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• [mri_violations] Make 'Resolution Status' select element have auto width

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• [Statistics] Fixed Permissions (aces#3852)

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• [Docs] Markdownify CodingStandards (aces#3858)

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• [imaging browser] Insert scan type in mri_violations_log when caveat set to true (aces#3803)

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• [instrument_list] fixing the _hasAccess() function - The variables are not initialized. (aces#3721)

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• [Middleware] Move getControlPanel call to after handle() (aces#3841)

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• [JS]modify the onclick function all range in the table data (aces#3851)

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• [Statistics] Update TestPlan steps regarding project filters (aces#3849)

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• [Candidate Parameters] Fixing Cannot Update Extra Parameters Added in Proband Information (aces#3832)

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• [jsx/Core] Restrict DateElement year to 4 digits (aces#3840)

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• [tools/Normalise_Consent_Data.php] Modify insert statement (aces#3857)

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• [Candidate_parameter] Update ProbandInfo page data without refreshing (aces#3838)

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• [tools] 20.0 tools and SQL moved to proper directory (aces#3855)

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• [API] Fix loading instruments from API (aces#3843)

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• [user accounts] Fixing users being always inserted into examiner table upon save (aces#3829)

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• [JSX] recompiling files before release (aces#3863)

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• update version file (aces#3814)

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• fixed spelling (aces#3865)

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• Fix typo in API endpoint (aces#3868)

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• [User Accounts] Fix editor perms (aces#3818)

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• Merge tag 'v19.1.2' into PUSH_19_1_2_TO_20_0

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• Merge pull request aces#3873 from ridz1208/PUSH_20_0_0_TO_BUGFIX

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• Merge remote-tracking branch 'aces/bugfix' into MinorMerge

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• Merge pull request aces#3876 from driusan/MinorMerge

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• [Help Editor] Use safe update instead of unsafe update (aces#3866)

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• cleanup and error management

  

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• fixed more warnings

  

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• empty subproject issue

  

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• more warnings removed

  

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• proper subprojects provided to render func

  

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• phpcs

  

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• typo

  

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• addressed changes

  

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• more requested changes

  

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• phpcs

  

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• fixed behaviour change

  

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• typo

  

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• made every variable case consistent

  

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• simplified some code, added comment

  

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• fixed inconsistency

  

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• comments and more cleanup

  

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• addressed some minor grievances

  

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• properly delimit subprojects for query

  

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• remove unnecessary Utility call

  

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• Merge branch 'stats_demographic_rework_rebase' into stats_drr2

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